Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.36■□□□□ 0.37
Ush1cQ9ES64 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Gm13474-201ENSMUST00000122466 815 ntBASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Gm18101-201ENSMUST00000215769 548 ntBASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Gm7213-201ENSMUST00000215977 950 ntBASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ush1cQ9ES64 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Gm22697-201ENSMUST00000175194 63 ntBASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ush1cQ9ES64 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ush1cQ9ES64 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ush1cQ9ES64 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1cQ9ES64 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1cQ9ES64 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ush1cQ9ES64 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms