Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ube3bQ9ES34 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Gm15483-201ENSMUST00000120338 456 ntBASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ube3bQ9ES34 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Ube3bQ9ES34 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube3bQ9ES34 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube3bQ9ES34 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube3bQ9ES34 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ube3bQ9ES34 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
Ube3bQ9ES34 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Gm14701-201ENSMUST00000117156 348 ntBASIC17.88■□□□□ 0.45
Ube3bQ9ES34 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.88■□□□□ 0.45
Ube3bQ9ES34 Gm43474-201ENSMUST00000196415 774 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms