Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.4■□□□□ 0.54
Ripk4Q9ERK0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ripk4Q9ERK0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ripk4Q9ERK0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ripk4Q9ERK0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ripk4Q9ERK0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Gm12008-201ENSMUST00000117791 755 ntBASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Gm14722-201ENSMUST00000118943 689 ntBASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Gm8318-201ENSMUST00000182954 872 ntBASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ripk4Q9ERK0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ripk4Q9ERK0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms