Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.02■□□□□ -0
Tubb3Q9ERD7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.02■□□□□ -0
Tubb3Q9ERD7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tubb3Q9ERD7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm7222-201ENSMUST00000117512 906 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm8825-201ENSMUST00000182565 998 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm4518-201ENSMUST00000182638 718 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm5364-201ENSMUST00000216789 889 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 AV026068-213ENSMUST00000223675 1171 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tubb3Q9ERD7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15□□□□□ -0.01
Tubb3Q9ERD7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Gm18622-201ENSMUST00000219361 595 ntBASIC15□□□□□ -0.01
Tubb3Q9ERD7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Gm15590-201ENSMUST00000078419 552 ntBASIC15□□□□□ -0.01
Tubb3Q9ERD7 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tubb3Q9ERD7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms