Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-4Q9EQM3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Gm9522-201ENSMUST00000182394 926 ntBASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-4Q9EQM3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nkx2-4Q9EQM3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx2-4Q9EQM3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.39■□□□□ 0.05
Nkx2-4Q9EQM3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms