Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upf1Q9EPU0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Gm43818-201ENSMUST00000200605 466 ntBASIC16.96■□□□□ 0.31
Upf1Q9EPU0 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upf1Q9EPU0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Upf1Q9EPU0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Upf1Q9EPU0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.96■□□□□ 0.3
Upf1Q9EPU0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.95■□□□□ 0.3
Upf1Q9EPU0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Gm12928-201ENSMUST00000117115 573 ntBASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Gm10012-201ENSMUST00000078252 192 ntBASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upf1Q9EPU0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Gm33320-201ENSMUST00000192232 530 ntBASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Gm6916-202ENSMUST00000205523 195 ntBASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upf1Q9EPU0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upf1Q9EPU0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms