Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp2aQ9DB34 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Psmb5-202ENSMUST00000227257 622 ntBASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp2aQ9DB34 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Gm14140-201ENSMUST00000119999 995 ntBASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Gm12260-201ENSMUST00000122447 411 ntBASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.77■□□□□ 0.12
Chmp2aQ9DB34 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp2aQ9DB34 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Gm27300-201ENSMUST00000184085 97 ntBASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Gm27335-201ENSMUST00000184758 97 ntBASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.76■□□□□ 0.11
Chmp2aQ9DB34 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chmp2aQ9DB34 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms