Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Stag1Q9D3E6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Stag1Q9D3E6 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Stag1Q9D3E6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Stag1Q9D3E6 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Gm2810-201ENSMUST00000118681 990 ntBASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Gm18737-201ENSMUST00000173594 937 ntBASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Stag1Q9D3E6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Gm15483-201ENSMUST00000120338 456 ntBASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Stag1Q9D3E6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.93■□□□□ 0.46
Stag1Q9D3E6 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.93■□□□□ 0.46
Stag1Q9D3E6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.92■□□□□ 0.46
Stag1Q9D3E6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Stag1Q9D3E6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms