Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Snrnp48Q9D361 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Snrnp48Q9D361 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.08■□□□□ 0
Snrnp48Q9D361 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.08■□□□□ 0
Snrnp48Q9D361 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Snrnp48Q9D361 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.08■□□□□ 0
Snrnp48Q9D361 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.07■□□□□ 0
Snrnp48Q9D361 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.07■□□□□ 0
Snrnp48Q9D361 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Snrnp48Q9D361 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Snrnp48Q9D361 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.07■□□□□ 0
Snrnp48Q9D361 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.07■□□□□ 0
Snrnp48Q9D361 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.07■□□□□ 0
Snrnp48Q9D361 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Snrnp48Q9D361 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Snrnp48Q9D361 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Snrnp48Q9D361 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.06■□□□□ 0
Snrnp48Q9D361 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.06■□□□□ 0
Snrnp48Q9D361 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.06■□□□□ 0
Snrnp48Q9D361 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.06■□□□□ 0
Snrnp48Q9D361 Gm43767-201ENSMUST00000198933 381 ntBASIC15.06■□□□□ 0
Snrnp48Q9D361 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.06■□□□□ 0
Snrnp48Q9D361 Gm18246-201ENSMUST00000221023 728 ntBASIC15.06■□□□□ 0
Snrnp48Q9D361 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.06■□□□□ 0
Snrnp48Q9D361 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms