Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vps33aQ9D2N9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Vps33aQ9D2N9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vps33aQ9D2N9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vps33aQ9D2N9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Gm715-201ENSMUST00000117865 831 ntBASIC16■□□□□ 0.15
Vps33aQ9D2N9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Gm7556-201ENSMUST00000201178 1084 ntBASIC16■□□□□ 0.15
Vps33aQ9D2N9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16■□□□□ 0.15
Vps33aQ9D2N9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Gm10812-201ENSMUST00000099864 546 ntBASIC16■□□□□ 0.15
Vps33aQ9D2N9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16■□□□□ 0.15
Vps33aQ9D2N9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16■□□□□ 0.15
Vps33aQ9D2N9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps33aQ9D2N9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms