Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.34□□□□□ -0.11
Upk1aQ9D132 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Upk1aQ9D132 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
Upk1aQ9D132 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Upk1aQ9D132 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.33□□□□□ -0.11
Upk1aQ9D132 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Upk1aQ9D132 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Upk1aQ9D132 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.33□□□□□ -0.12
Upk1aQ9D132 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.33□□□□□ -0.12
Upk1aQ9D132 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Upk1aQ9D132 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Mir3081-201ENSMUST00000175305 84 ntBASIC14.32□□□□□ -0.12
Upk1aQ9D132 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Upk1aQ9D132 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.31□□□□□ -0.12
Upk1aQ9D132 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.31□□□□□ -0.12
Upk1aQ9D132 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms