Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Mir7032-201ENSMUST00000185154 79 ntBASIC16■□□□□ 0.15
Lysmd1Q9D0E3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16■□□□□ 0.15
Lysmd1Q9D0E3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Rps4l-202ENSMUST00000204242 789 ntBASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Fam105a-203ENSMUST00000226170 3043 ntBASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lysmd1Q9D0E3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Gm19309-201ENSMUST00000218295 205 ntBASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lysmd1Q9D0E3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Gm2383-201ENSMUST00000181461 807 ntBASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Gm43818-201ENSMUST00000200605 466 ntBASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lysmd1Q9D0E3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Gm15393-201ENSMUST00000120499 219 ntBASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Gm38341-201ENSMUST00000195357 515 ntBASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lysmd1Q9D0E3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd1Q9D0E3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lysmd1Q9D0E3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Lysmd1Q9D0E3 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms