Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Gm2756-201ENSMUST00000195851 400 ntBASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Otud1Q9CUB6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Otud1Q9CUB6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Sybu-209ENSMUST00000228639 4113 ntBASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Otud1Q9CUB6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.26□□□□□ -0.13
Otud1Q9CUB6 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Gm20553-201ENSMUST00000204205 844 ntBASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.26□□□□□ -0.13
Otud1Q9CUB6 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Otud1Q9CUB6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Otud1Q9CUB6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms