Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Gm45053-201ENSMUST00000206112 2499 ntBASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sec61bQ9CQS8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Gm6226-201ENSMUST00000117765 1146 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Gm12017-201ENSMUST00000122453 1003 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 AC124732.2-201ENSMUST00000221977 316 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 AC140397.2-201ENSMUST00000224213 834 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Gm43636-201ENSMUST00000201501 2235 ntBASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sec61bQ9CQS8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 AC154186.1-201ENSMUST00000227711 1597 ntBASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Gm12106-201ENSMUST00000116006 1200 ntBASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Sec61bQ9CQS8 Gm13616-201ENSMUST00000120600 222 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms