Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ska1Q9CPV1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.28□□□□□ -0.12
Ska1Q9CPV1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ska1Q9CPV1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Ska1Q9CPV1 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Gm27704-201ENSMUST00000185094 107 ntBASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Gm33142-201ENSMUST00000193913 867 ntBASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ska1Q9CPV1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Olfr129-201ENSMUST00000122318 993 ntBASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ska1Q9CPV1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ska1Q9CPV1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms