Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm9229-201ENSMUST00000222777 126 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm29310-201ENSMUST00000185468 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21825-201ENSMUST00000185728 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm29109-201ENSMUST00000185895 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21896-201ENSMUST00000186520 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21873-201ENSMUST00000186728 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21794-201ENSMUST00000187056 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21880-201ENSMUST00000187275 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21826-201ENSMUST00000187451 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21198-201ENSMUST00000188393 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21749-201ENSMUST00000189343 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21901-201ENSMUST00000189568 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm29424-201ENSMUST00000189716 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm28599-201ENSMUST00000189838 694 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21867-201ENSMUST00000189917 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm29269-201ENSMUST00000190087 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21722-201ENSMUST00000190153 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm28423-201ENSMUST00000190701 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21899-201ENSMUST00000190745 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21910-201ENSMUST00000191163 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21849-201ENSMUST00000191571 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm28678-201ENSMUST00000191593 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm20910-201ENSMUST00000193268 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm21871-201ENSMUST00000194621 696 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh23Q99PF4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh23Q99PF4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gm15236-201ENSMUST00000117309 379 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gm14722-201ENSMUST00000118943 689 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gm45784-201ENSMUST00000188360 142 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gm8969-201ENSMUST00000199694 526 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Mir6392-201ENSMUST00000184924 108 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Olfr582-201ENSMUST00000098212 960 ntBASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh23Q99PF4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Gm28911-201ENSMUST00000188837 117 ntBASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.16■□□□□ 0.02
Cdh23Q99PF4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms