Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Raf1Q99N57 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Raf1Q99N57 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Raf1Q99N57 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Raf1Q99N57 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Raf1Q99N57 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Raf1Q99N57 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.58□□□□□ -0.24
Raf1Q99N57 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.58□□□□□ -0.24
Raf1Q99N57 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.58□□□□□ -0.24
Raf1Q99N57 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.58□□□□□ -0.24
Raf1Q99N57 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.58□□□□□ -0.24
Raf1Q99N57 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.58□□□□□ -0.24
Raf1Q99N57 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Raf1Q99N57 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Raf1Q99N57 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Raf1Q99N57 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.57□□□□□ -0.24
Raf1Q99N57 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Raf1Q99N57 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.56□□□□□ -0.24
Raf1Q99N57 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Raf1Q99N57 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Raf1Q99N57 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Raf1Q99N57 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Raf1Q99N57 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Raf1Q99N57 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Raf1Q99N57 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms