Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.24□□□□□ -0.29
Scrt1Q99M85 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Gm27622-201ENSMUST00000183779 60 ntBASIC13.24□□□□□ -0.29
Scrt1Q99M85 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
Scrt1Q99M85 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.24□□□□□ -0.29
Scrt1Q99M85 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.24□□□□□ -0.29
Scrt1Q99M85 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Scrt1Q99M85 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Rprl2-201ENSMUST00000157150 290 ntBASIC13.23□□□□□ -0.29
Scrt1Q99M85 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.23□□□□□ -0.29
Scrt1Q99M85 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.23□□□□□ -0.29
Scrt1Q99M85 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Scrt1Q99M85 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 Gm9385-201ENSMUST00000117563 472 ntBASIC13.22□□□□□ -0.29
Scrt1Q99M85 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.22□□□□□ -0.29
Scrt1Q99M85 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms