Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdk5rap3Q99LM2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Celf4-206ENSMUST00000224553 1729 ntBASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Gm12644-201ENSMUST00000119935 606 ntBASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk5rap3Q99LM2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdk5rap3Q99LM2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Cdk5rap3Q99LM2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap3Q99LM2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap3Q99LM2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdk5rap3Q99LM2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Cdk5rap3Q99LM2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap3Q99LM2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdk5rap3Q99LM2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms