Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm10013-201ENSMUST00000106074 672 ntBASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cttnbp2nlQ99LJ0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Cttnbp2nlQ99LJ0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Gm7977-201ENSMUST00000193787 748 ntBASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cttnbp2nlQ99LJ0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms