Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd3Q99LE3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.66■□□□□ 0.1
Lysmd3Q99LE3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Gm9385-201ENSMUST00000117563 472 ntBASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lysmd3Q99LE3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.64■□□□□ 0.1
Lysmd3Q99LE3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lysmd3Q99LE3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lysmd3Q99LE3 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms