Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lims1Q99JW4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.78□□□□□ -0.2
Lims1Q99JW4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Gm43767-201ENSMUST00000198933 381 ntBASIC13.78□□□□□ -0.2
Lims1Q99JW4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lims1Q99JW4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lims1Q99JW4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Lims1Q99JW4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lims1Q99JW4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Lims1Q99JW4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm17807-201ENSMUST00000186869 298 ntBASIC13.77□□□□□ -0.21
Lims1Q99JW4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.77□□□□□ -0.21
Lims1Q99JW4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.77□□□□□ -0.21
Lims1Q99JW4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.77□□□□□ -0.21
Lims1Q99JW4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Lims1Q99JW4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.76□□□□□ -0.21
Lims1Q99JW4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Gm10499-201ENSMUST00000174094 934 ntBASIC13.76□□□□□ -0.21
Lims1Q99JW4 Gm27646-201ENSMUST00000183989 110 ntBASIC13.76□□□□□ -0.21
Lims1Q99JW4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Lims1Q99JW4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms