Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfc4Q99J62 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.37■□□□□ 0.37
Rfc4Q99J62 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.37■□□□□ 0.37
Rfc4Q99J62 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.37■□□□□ 0.37
Rfc4Q99J62 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.37■□□□□ 0.37
Rfc4Q99J62 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfc4Q99J62 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Gm15483-201ENSMUST00000120338 456 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Gm18049-201ENSMUST00000208909 581 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Gm2423-201ENSMUST00000074863 733 ntBASIC17.36■□□□□ 0.37
Rfc4Q99J62 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.36■□□□□ 0.37
Rfc4Q99J62 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.35■□□□□ 0.37
Rfc4Q99J62 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Prob1-201ENSMUST00000097619 3021 ntBASIC17.35■□□□□ 0.37
Rfc4Q99J62 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.35■□□□□ 0.37
Rfc4Q99J62 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.35■□□□□ 0.37
Rfc4Q99J62 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfc4Q99J62 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Gm13823-201ENSMUST00000119930 345 ntBASIC17.34■□□□□ 0.37
Rfc4Q99J62 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Gm25144-201ENSMUST00000179561 110 ntBASIC17.34■□□□□ 0.37
Rfc4Q99J62 Gm25352-201ENSMUST00000179815 110 ntBASIC17.34■□□□□ 0.37
Rfc4Q99J62 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.34■□□□□ 0.37
Rfc4Q99J62 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfc4Q99J62 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.33■□□□□ 0.37
Rfc4Q99J62 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfc4Q99J62 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms