Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Thap2-203ENSMUST00000218989 527 ntBASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb22Q91XZ8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb22Q91XZ8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Gm16198-201ENSMUST00000118766 670 ntBASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb22Q91XZ8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdhb22Q91XZ8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb22Q91XZ8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Gm45747-201ENSMUST00000212203 999 ntBASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb22Q91XZ8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms