Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhga11Q91XY8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Gm5864-201ENSMUST00000202263 970 ntBASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhga11Q91XY8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhga11Q91XY8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhga11Q91XY8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhga11Q91XY8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
Pcdhga11Q91XY8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms