Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm42693-201ENSMUST00000196779 631 ntBASIC17.71■□□□□ 0.43
StrcQ8VIM6 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
StrcQ8VIM6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
StrcQ8VIM6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Gm9726-201ENSMUST00000180321 678 ntBASIC17.7■□□□□ 0.42
StrcQ8VIM6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.7■□□□□ 0.42
StrcQ8VIM6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.7■□□□□ 0.42
StrcQ8VIM6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.7■□□□□ 0.42
StrcQ8VIM6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.7■□□□□ 0.42
StrcQ8VIM6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
StrcQ8VIM6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC17.69■□□□□ 0.42
StrcQ8VIM6 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.69■□□□□ 0.42
StrcQ8VIM6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.69■□□□□ 0.42
StrcQ8VIM6 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.69■□□□□ 0.42
StrcQ8VIM6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
StrcQ8VIM6 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
StrcQ8VIM6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.68■□□□□ 0.42
StrcQ8VIM6 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.68■□□□□ 0.42
StrcQ8VIM6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
StrcQ8VIM6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.68■□□□□ 0.42
StrcQ8VIM6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.68■□□□□ 0.42
StrcQ8VIM6 Gm44799-201ENSMUST00000207639 1202 ntBASIC17.68■□□□□ 0.42
StrcQ8VIM6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.67■□□□□ 0.42
StrcQ8VIM6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Gm10275-202ENSMUST00000168697 495 ntBASIC17.67■□□□□ 0.42
StrcQ8VIM6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Gm10275-201ENSMUST00000092620 635 ntBASIC17.67■□□□□ 0.42
StrcQ8VIM6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.67■□□□□ 0.42
StrcQ8VIM6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
StrcQ8VIM6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
StrcQ8VIM6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms