Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rab40cQ8VHQ4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rab40cQ8VHQ4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rab40cQ8VHQ4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.34□□□□□ -0.43
Rab40cQ8VHQ4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms