Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ndc1Q8VCB1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ndc1Q8VCB1 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Gm26308-201ENSMUST00000157768 69 ntBASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Gm18246-201ENSMUST00000221023 728 ntBASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ndc1Q8VCB1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Gm8318-201ENSMUST00000182954 872 ntBASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ndc1Q8VCB1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ndc1Q8VCB1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms