Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Mir8098-201ENSMUST00000184011 137 ntBASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gm7506-201ENSMUST00000207758 815 ntBASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Rnf8Q8VC56 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf8Q8VC56 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf8Q8VC56 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
Rnf8Q8VC56 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf8Q8VC56 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.58□□□□□ -0.07
Rnf8Q8VC56 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf8Q8VC56 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf8Q8VC56 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf8Q8VC56 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms