Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vps39Q8R5L3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Ank2-226ENSMUST00000189368 339 ntBASIC15.15■□□□□ 0.02
Vps39Q8R5L3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps39Q8R5L3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Gm11780-201ENSMUST00000136880 516 ntBASIC15.14■□□□□ 0.01
Vps39Q8R5L3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps39Q8R5L3 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps39Q8R5L3 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.12■□□□□ 0.01
Vps39Q8R5L3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms