Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nup35Q8R4R6 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Nup35Q8R4R6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Celf4-206ENSMUST00000224553 1729 ntBASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nup35Q8R4R6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Carlr-201ENSMUST00000181515 2574 ntBASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Grk6-207ENSMUST00000225925 2769 ntBASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nup35Q8R4R6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms