Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.84□□□□□ -0.03
Chrna3Q8R4G9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna3Q8R4G9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna3Q8R4G9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.84□□□□□ -0.03
Chrna3Q8R4G9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna3Q8R4G9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Chrna3Q8R4G9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chrna3Q8R4G9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Chrna3Q8R4G9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.83□□□□□ -0.03
Chrna3Q8R4G9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Gm27397-201ENSMUST00000184997 107 ntBASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Chrna3Q8R4G9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Gm24513-201ENSMUST00000174964 138 ntBASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Asic1-205ENSMUST00000228185 1818 ntBASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Chrna3Q8R4G9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gm6736-201ENSMUST00000166583 948 ntBASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gm27702-201ENSMUST00000184512 56 ntBASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.81□□□□□ -0.04
Chrna3Q8R4G9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms