Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nup85Q8R480 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nup85Q8R480 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nup85Q8R480 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nup85Q8R480 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.54■□□□□ 0.08
Nup85Q8R480 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Gm12260-201ENSMUST00000122447 411 ntBASIC15.54■□□□□ 0.08
Nup85Q8R480 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.54■□□□□ 0.08
Nup85Q8R480 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.54■□□□□ 0.08
Nup85Q8R480 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nup85Q8R480 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nup85Q8R480 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nup85Q8R480 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.53■□□□□ 0.08
Nup85Q8R480 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nup85Q8R480 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.53■□□□□ 0.08
Nup85Q8R480 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm11594-201ENSMUST00000122313 162 ntBASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm9727-201ENSMUST00000161387 555 ntBASIC15.52■□□□□ 0.08
Nup85Q8R480 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.52■□□□□ 0.08
Nup85Q8R480 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Gm2213-201ENSMUST00000197485 688 ntBASIC15.52■□□□□ 0.08
Nup85Q8R480 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.52■□□□□ 0.08
Nup85Q8R480 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nup85Q8R480 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup85Q8R480 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup85Q8R480 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup85Q8R480 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nup85Q8R480 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup85Q8R480 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup85Q8R480 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup85Q8R480 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup85Q8R480 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms