Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Zcchc9Q8R1J3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Zcchc9Q8R1J3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 AA543401-201ENSMUST00000164248 1269 ntBASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm5312-201ENSMUST00000203728 547 ntBASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm45612-201ENSMUST00000211320 160 ntBASIC15.08■□□□□ 0
Zcchc9Q8R1J3 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Thap2-203ENSMUST00000218989 527 ntBASIC15.08■□□□□ 0
Zcchc9Q8R1J3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.08■□□□□ 0
Zcchc9Q8R1J3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.07■□□□□ 0
Zcchc9Q8R1J3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Zcchc9Q8R1J3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Zcchc9Q8R1J3 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.05■□□□□ 0
Zcchc9Q8R1J3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.05■□□□□ 0
Zcchc9Q8R1J3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms