Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Rpph1-201ENSMUST00000175096 319 ntBASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Gm20553-201ENSMUST00000204205 844 ntBASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Gm5867-201ENSMUST00000063197 592 ntBASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rpp40Q8R1F9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Gm6736-201ENSMUST00000166583 948 ntBASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Gm43575-201ENSMUST00000196420 516 ntBASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rpp40Q8R1F9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.14■□□□□ 0.18
Rpp40Q8R1F9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm23935-201ENSMUST00000102303 57 ntBASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm24270-201ENSMUST00000102326 57 ntBASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gm24245-201ENSMUST00000157318 57 ntBASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rpp40Q8R1F9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rpp40Q8R1F9 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms