Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CipcQ8R0W1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CipcQ8R0W1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.32□□□□□ -0.12
CipcQ8R0W1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Gm18489-201ENSMUST00000172565 551 ntBASIC14.32□□□□□ -0.12
CipcQ8R0W1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.32□□□□□ -0.12
CipcQ8R0W1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.32□□□□□ -0.12
CipcQ8R0W1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CipcQ8R0W1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.31□□□□□ -0.12
CipcQ8R0W1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Gm9727-201ENSMUST00000161387 555 ntBASIC14.31□□□□□ -0.12
CipcQ8R0W1 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.31□□□□□ -0.12
CipcQ8R0W1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.31□□□□□ -0.12
CipcQ8R0W1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.31□□□□□ -0.12
CipcQ8R0W1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CipcQ8R0W1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CipcQ8R0W1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.3□□□□□ -0.12
CipcQ8R0W1 Gm2213-201ENSMUST00000197485 688 ntBASIC14.3□□□□□ -0.12
CipcQ8R0W1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.3□□□□□ -0.12
CipcQ8R0W1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms