Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gm18246-201ENSMUST00000221023 728 ntBASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Gm15590-201ENSMUST00000078419 552 ntBASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atf7Q8R0S1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atf7Q8R0S1 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.83■□□□□ 0.44
Atf7Q8R0S1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atf7Q8R0S1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Gm27628-201ENSMUST00000184911 107 ntBASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.82■□□□□ 0.44
Atf7Q8R0S1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atf7Q8R0S1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Gm12350-201ENSMUST00000121208 462 ntBASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atf7Q8R0S1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atf7Q8R0S1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms