Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
Cystm1Q8K353 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cystm1Q8K353 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.52□□□□□ -0.88
Cystm1Q8K353 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Cystm1Q8K353 Rbfox2-206ENSMUST00000227314 1810 ntBASIC9.52□□□□□ -0.89
Cystm1Q8K353 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.52□□□□□ -0.89
Cystm1Q8K353 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC9.52□□□□□ -0.89
Cystm1Q8K353 AC162938.1-201ENSMUST00000213140 2323 ntBASIC9.52□□□□□ -0.89
Cystm1Q8K353 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Cystm1Q8K353 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm38327-201ENSMUST00000195852 1755 ntBASIC9.51□□□□□ -0.89
Cystm1Q8K353 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm18958-201ENSMUST00000174258 762 ntBASIC9.51□□□□□ -0.89
Cystm1Q8K353 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.51□□□□□ -0.89
Cystm1Q8K353 AC159205.3-201ENSMUST00000224614 874 ntBASIC9.51□□□□□ -0.89
Cystm1Q8K353 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Actl10-202ENSMUST00000226583 1501 ntBASIC9.51□□□□□ -0.89
Cystm1Q8K353 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Cystm1Q8K353 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms