Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cchcr1Q8K2I2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Gm13418-201ENSMUST00000119097 944 ntBASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cchcr1Q8K2I2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
Cchcr1Q8K2I2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44357-201ENSMUST00000195897 142 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm19658-201ENSMUST00000196231 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44367-201ENSMUST00000196836 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44350-201ENSMUST00000197197 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44390-201ENSMUST00000197533 144 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm6089-201ENSMUST00000197666 938 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44313-201ENSMUST00000198018 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44486-201ENSMUST00000198508 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44314-201ENSMUST00000199263 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44394-201ENSMUST00000199558 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44484-201ENSMUST00000199873 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44466-201ENSMUST00000200264 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Gm44359-201ENSMUST00000200671 138 ntBASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.85■□□□□ 0.45
Cchcr1Q8K2I2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms