Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Gm45612-201ENSMUST00000211320 160 ntBASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rbm28Q8CGC6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rbm28Q8CGC6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Rbm28Q8CGC6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm14701-201ENSMUST00000117156 348 ntBASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm12008-201ENSMUST00000117791 755 ntBASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm8396-201ENSMUST00000057361 823 ntBASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Rbm28Q8CGC6 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rbm28Q8CGC6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms