Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Smc4Q8CG47 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.57■□□□□ 0.56
Smc4Q8CG47 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Gm25925-201ENSMUST00000158314 306 ntBASIC18.57■□□□□ 0.56
Smc4Q8CG47 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Gm5312-201ENSMUST00000203728 547 ntBASIC18.57■□□□□ 0.56
Smc4Q8CG47 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smc4Q8CG47 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc4Q8CG47 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.56■□□□□ 0.56
Smc4Q8CG47 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.56■□□□□ 0.56
Smc4Q8CG47 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc4Q8CG47 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Gm15920-201ENSMUST00000118998 402 ntBASIC18.55■□□□□ 0.56
Smc4Q8CG47 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Gm11543-201ENSMUST00000120758 370 ntBASIC18.55■□□□□ 0.56
Smc4Q8CG47 Gm18737-201ENSMUST00000173594 937 ntBASIC18.55■□□□□ 0.56
Smc4Q8CG47 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.55■□□□□ 0.56
Smc4Q8CG47 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smc4Q8CG47 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.54■□□□□ 0.56
Smc4Q8CG47 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 AC164567.1-201ENSMUST00000219185 960 ntBASIC18.54■□□□□ 0.56
Smc4Q8CG47 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc4Q8CG47 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms