Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Gm18018-201ENSMUST00000198273 408 ntBASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rtp1Q8C8C1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Asic1-205ENSMUST00000228185 1818 ntBASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rtp1Q8C8C1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Gm14042-201ENSMUST00000120139 833 ntBASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp1Q8C8C1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtp1Q8C8C1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtp1Q8C8C1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtp1Q8C8C1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gm43630-201ENSMUST00000201550 776 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gm9115-201ENSMUST00000120192 1348 ntBASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp1Q8C8C1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp1Q8C8C1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms