Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Uba3Q8C878 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Uba3Q8C878 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Uba3Q8C878 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.91■□□□□ 0.14
Uba3Q8C878 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Uba3Q8C878 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Gm9727-201ENSMUST00000161387 555 ntBASIC15.91■□□□□ 0.14
Uba3Q8C878 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Uba3Q8C878 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Uba3Q8C878 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.91■□□□□ 0.14
Uba3Q8C878 Celf4-206ENSMUST00000224553 1729 ntBASIC15.91■□□□□ 0.14
Uba3Q8C878 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Uba3Q8C878 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Uba3Q8C878 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.9■□□□□ 0.14
Uba3Q8C878 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Uba3Q8C878 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Uba3Q8C878 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Uba3Q8C878 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Uba3Q8C878 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Uba3Q8C878 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.89■□□□□ 0.13
Uba3Q8C878 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Uba3Q8C878 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Uba3Q8C878 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Gm11779-201ENSMUST00000118541 368 ntBASIC15.89■□□□□ 0.13
Uba3Q8C878 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.89■□□□□ 0.13
Uba3Q8C878 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.89■□□□□ 0.13
Uba3Q8C878 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.89■□□□□ 0.13
Uba3Q8C878 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Uba3Q8C878 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.89■□□□□ 0.13
Uba3Q8C878 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Uba3Q8C878 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms