Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim9Q8C7M3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Gm27300-201ENSMUST00000184085 97 ntBASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Gm27335-201ENSMUST00000184758 97 ntBASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Gm2651-201ENSMUST00000203560 838 ntBASIC16.66■□□□□ 0.26
Trim9Q8C7M3 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.66■□□□□ 0.26
Trim9Q8C7M3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim9Q8C7M3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim9Q8C7M3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim9Q8C7M3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim9Q8C7M3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim9Q8C7M3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim9Q8C7M3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim9Q8C7M3 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms