Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.53■□□□□ 0.24
Lin9Q8C735 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.53■□□□□ 0.24
Lin9Q8C735 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lin9Q8C735 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Lin9Q8C735 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
Lin9Q8C735 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.53■□□□□ 0.24
Lin9Q8C735 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.53■□□□□ 0.24
Lin9Q8C735 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin9Q8C735 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin9Q8C735 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Lin9Q8C735 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lin9Q8C735 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.52■□□□□ 0.24
Lin9Q8C735 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin9Q8C735 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
Lin9Q8C735 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin9Q8C735 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin9Q8C735 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Lin9Q8C735 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.52■□□□□ 0.23
Lin9Q8C735 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin9Q8C735 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Lin9Q8C735 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.51■□□□□ 0.23
Lin9Q8C735 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.51■□□□□ 0.23
Lin9Q8C735 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lin9Q8C735 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lin9Q8C735 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.51■□□□□ 0.23
Lin9Q8C735 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin9Q8C735 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Lin9Q8C735 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.5■□□□□ 0.23
Lin9Q8C735 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lin9Q8C735 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lin9Q8C735 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Lin9Q8C735 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Lin9Q8C735 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.5■□□□□ 0.23
Lin9Q8C735 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Lin9Q8C735 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin9Q8C735 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.49■□□□□ 0.23
Lin9Q8C735 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lin9Q8C735 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin9Q8C735 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms