Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp44Q8C2S0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Thap2-203ENSMUST00000218989 527 ntBASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Usp44Q8C2S0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp44Q8C2S0 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp44Q8C2S0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp44Q8C2S0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Gm9385-201ENSMUST00000117563 472 ntBASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Gm12260-201ENSMUST00000122447 411 ntBASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp44Q8C2S0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Mir8117-201ENSMUST00000184773 107 ntBASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp44Q8C2S0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms