Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sh3rf3Q8C120 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Gm18489-201ENSMUST00000172565 551 ntBASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sh3rf3Q8C120 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Gm4899-201ENSMUST00000178708 719 ntBASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Gm15590-201ENSMUST00000078419 552 ntBASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Efs-202ENSMUST00000227037 2540 ntBASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sh3rf3Q8C120 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 AV026068-213ENSMUST00000223675 1171 ntBASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sh3rf3Q8C120 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Gm13036-201ENSMUST00000117799 748 ntBASIC15.72■□□□□ 0.11
Sh3rf3Q8C120 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms