Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nek11Q8C0Q4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nek11Q8C0Q4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nek11Q8C0Q4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nek11Q8C0Q4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Gm5177-201ENSMUST00000183092 997 ntBASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Gm27525-201ENSMUST00000184465 107 ntBASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Gm6443-201ENSMUST00000203599 874 ntBASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nek11Q8C0Q4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Gm17968-201ENSMUST00000194902 784 ntBASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Gm2272-201ENSMUST00000194903 582 ntBASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Nek11Q8C0Q4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nek11Q8C0Q4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Gm11779-201ENSMUST00000118541 368 ntBASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Gm12260-201ENSMUST00000122447 411 ntBASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nek11Q8C0Q4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms