Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.35□□□□□ -0.27
SprnQ8BWU1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.35□□□□□ -0.27
SprnQ8BWU1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SprnQ8BWU1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Gm7153-201ENSMUST00000117092 455 ntBASIC13.34□□□□□ -0.27
SprnQ8BWU1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.34□□□□□ -0.27
SprnQ8BWU1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.34□□□□□ -0.27
SprnQ8BWU1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SprnQ8BWU1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
SprnQ8BWU1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.33□□□□□ -0.27
SprnQ8BWU1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SprnQ8BWU1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SprnQ8BWU1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SprnQ8BWU1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.33□□□□□ -0.27
SprnQ8BWU1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SprnQ8BWU1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.33□□□□□ -0.28
SprnQ8BWU1 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.33□□□□□ -0.28
SprnQ8BWU1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SprnQ8BWU1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.33□□□□□ -0.28
SprnQ8BWU1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.33□□□□□ -0.28
SprnQ8BWU1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms