Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ckap4Q8BMK4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ckap4Q8BMK4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Gm12895-201ENSMUST00000122214 226 ntBASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ckap4Q8BMK4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Gm25745-201ENSMUST00000174945 133 ntBASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ckap4Q8BMK4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm12497-201ENSMUST00000138778 237 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm8825-201ENSMUST00000182565 998 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm4518-201ENSMUST00000182638 718 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.31□□□□□ -0.12
Ckap4Q8BMK4 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms